Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein ysda, duf1294 family | SAMN05216462_2456 | Not Available | Positive | 2922147 - 2922425 | 10221.2 |
| uncharacterized membrane protein yeaq/ymge, transglycosylase-associated protein family | SAMN05216462_2457 | Not Available | Positive | 2922475 - 2922738 | 9697.14 |
| hypothetical protein | SAMN05216462_2458 | Not Available | Positive | 2922741 - 2923019 | 10785.1 |
| pyruvate phosphate dikinase | SAMN05216462_2459 | Not Available | Negative | 2923142 - 2925862 | 99773.3 |
| 23s rrna (uracil1939-c5)-methyltransferase | SAMN05216462_2460 | Not Available | Positive | 2926014 - 2927516 | 56902.4 |
| phosphate-selective porin o and p | SAMN05216462_2461 | Not Available | Positive | 2927633 - 2928766 | 42767.5 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05216462_2462 | Not Available | Negative | 2928727 - 2930184 | 52856.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05216462_2463 | Not Available | Positive | 2930257 - 2931132 | 33426.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05216462_2464 | Not Available | Positive | 2931081 - 2932082 | 38432.2 |
| hypothetical protein | SAMN05216462_2465 | Not Available | Positive | 2932079 - 2933170 | 42114.1 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
