Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | SAMN05216462_2395 | Not Available | Positive | 2858126 - 2859664 | 57766.0 |
| sugar (pentulose or hexulose) kinase | SAMN05216462_2396 | Not Available | Positive | 2859688 - 2861274 | 57631.1 |
| alpha-n-arabinofuranosidase | SAMN05216462_2397 | Not Available | Positive | 2861289 - 2862881 | 59381.3 |
| lysophospholipase l1 | SAMN05216462_2398 | Not Available | Negative | 2862897 - 2863724 | 31775.9 |
| beta-glucosidase | SAMN05216462_2399 | Not Available | Positive | 2863820 - 2866066 | 82529.4 |
| hypothetical protein | SAMN05216462_2400 | Not Available | Negative | 2866110 - 2866217 | 4145.0 |
| two component transcriptional regulator, lyttr family | SAMN05216462_2401 | Not Available | Negative | 2866359 - 2867123 | 28534.2 |
| histidine kinase | SAMN05216462_2402 | Not Available | Negative | 2867147 - 2867935 | 30247.8 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05216462_2403 | Not Available | Negative | 2868010 - 2869293 | 46446.3 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05216462_2404 | Not Available | Negative | 2869300 - 2872485 | 116061.0 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
