Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMN05216462_2320 | Not Available | Positive | 2783074 - 2783793 | 26251.8 |
| cyclase | SAMN05216462_2321 | Not Available | Positive | 2783796 - 2784554 | 27424.5 |
| phosphoribosyl-atp pyrophosphatase /phosphoribosyl-amp cyclohydrolase | SAMN05216462_2322 | Not Available | Positive | 2784581 - 2785225 | 24166.6 |
| cell division transport system atp-binding protein | SAMN05216462_2323 | Not Available | Positive | 2785269 - 2785952 | 25320.7 |
| aspartate kinase | SAMN05216462_2324 | Not Available | Positive | 2786006 - 2787325 | 48984.7 |
| diaminopimelate decarboxylase | SAMN05216462_2325 | Not Available | Positive | 2787381 - 2788541 | 42859.6 |
| hypothetical protein | SAMN05216462_2327 | Not Available | Positive | 2789208 - 2790287 | 41281.1 |
| fructose-1,6-bisphosphatase-3 | SAMN05216462_2328 | Not Available | Positive | 2790284 - 2792257 | 75325.0 |
| protein of unknown function | SAMN05216462_2329 | Not Available | Positive | 2792254 - 2793471 | 47294.0 |
| helix-turn-helix domain-containing protein | SAMN05216462_2330 | Not Available | Negative | 2793440 - 2795890 | 93974.0 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
