Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05216462_2310 | Not Available | Negative | 2768573 - 2771734 | 117493.0 |
| signal transduction histidine kinase | SAMN05216462_2311 | Not Available | Positive | 2772016 - 2775876 | 144633.0 |
| hypothetical protein | SAMN05216462_2312 | Not Available | Negative | 2775884 - 2776576 | 25741.8 |
| transcriptional regulator, lyttr family | SAMN05216462_2313 | Not Available | Positive | 2776717 - 2777544 | 31426.4 |
| tonb dependent receptor | SAMN05216462_2314 | Not Available | Positive | 2777630 - 2779708 | 77387.6 |
| hypothetical protein | SAMN05216462_2315 | Not Available | Positive | 2779689 - 2780180 | 18174.1 |
| hypothetical protein | SAMN05216462_2316 | Not Available | Negative | 2780201 - 2780956 | 26668.0 |
| transcription elongation factor grea | SAMN05216462_2317 | Not Available | Negative | 2780971 - 2781438 | 17259.0 |
| formyltetrahydrofolate deformylase | SAMN05216462_2318 | Not Available | Positive | 2781627 - 2782490 | 33598.9 |
| glutamine amidotransferase | SAMN05216462_2319 | Not Available | Positive | 2782487 - 2783077 | 22295.9 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
