Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase-4 | SAMN05216462_2300 | Not Available | Negative | 2755951 - 2757039 | 41219.6 |
| hypothetical protein | SAMN05216462_2301 | Not Available | Negative | 2757042 - 2757143 | 3581.38 |
| wyl domain-containing protein | SAMN05216462_2302 | Not Available | Negative | 2757234 - 2758124 | 34812.8 |
| branched-chain amino acid transport protein (azld) | SAMN05216462_2303 | Not Available | Negative | 2758204 - 2758512 | 11307.6 |
| predicted branched-chain amino acid permease (azaleucine resistance) | SAMN05216462_2304 | Not Available | Negative | 2758505 - 2759233 | 25466.6 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN05216462_2305 | Not Available | Positive | 2759329 - 2760057 | 27378.6 |
| hypothetical protein | SAMN05216462_2306 | Not Available | Negative | 2760226 - 2761911 | 61839.0 |
| starch-binding associating with outer membrane | SAMN05216462_2307 | Not Available | Negative | 2761950 - 2763647 | 63943.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216462_2308 | Not Available | Negative | 2763671 - 2766463 | 103451.0 |
| starch-binding associating with outer membrane | SAMN05216462_2309 | Not Available | Negative | 2766515 - 2768551 | 77532.7 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
