Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216462_2184 | Not Available | Negative | 2648381 - 2648734 | 13294.0 |
| fkbp-type peptidyl prolyl cis-trans isomerase /apo-metallochaperone slyd | SAMN05216462_2185 | Not Available | Positive | 2649051 - 2649641 | 21493.8 |
| chorismate synthase | SAMN05216462_2186 | Not Available | Positive | 2649668 - 2650759 | 39364.6 |
| dihydroorotate dehydrogenase (nad+) catalytic subunit | SAMN05216462_2187 | Not Available | Negative | 2650957 - 2651862 | 31870.9 |
| dihydroorotate dehydrogenase electron transfer subunit | SAMN05216462_2188 | Not Available | Negative | 2651850 - 2652623 | 28293.8 |
| helix-turn-helix | SAMN05216462_2189 | Not Available | Negative | 2652681 - 2653169 | 18707.2 |
| dna polymerase iii, delta subunit | SAMN05216462_2190 | Not Available | Negative | 2653945 - 2654973 | 39169.3 |
| type i restriction enzyme r protein n terminus (hsdr_n) | SAMN05216462_2191 | Not Available | Positive | 2655022 - 2655471 | 17658.6 |
| hypothetical protein | SAMN05216462_2192 | Not Available | Negative | 2655481 - 2656338 | 32736.1 |
| dinuclear metal center protein, ybgi/sa1388 family | SAMN05216462_2193 | Not Available | Negative | 2656355 - 2657200 | 30935.6 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
