Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein phosphatase | SAMN05216462_2134 | Not Available | Negative | 2592417 - 2593145 | 26209.6 |
| forkhead associated (fha) domain, binds pser, pthr, ptyr | SAMN05216462_2135 | Not Available | Negative | 2593176 - 2593925 | 26134.5 |
| aaa+-type atpase, spovk/ycf46/vps4 family | SAMN05216462_2136 | Not Available | Negative | 2593932 - 2597237 | 124302.0 |
| serine/threonine protein kinase | SAMN05216462_2137 | Not Available | Negative | 2597244 - 2600675 | 129941.0 |
| double zinc ribbon | SAMN05216462_2138 | Not Available | Negative | 2600675 - 2601598 | 34571.3 |
| putative endopeptidase | SAMN05216462_2139 | Not Available | Negative | 2601717 - 2603750 | 76758.3 |
| atp-binding cassette, subfamily f, member 3 | SAMN05216462_2140 | Not Available | Negative | 2603764 - 2605755 | 75142.1 |
| outer membrane lipoprotein carrier protein lola | SAMN05216462_2141 | Not Available | Negative | 2605752 - 2606369 | 23901.0 |
| uncharacterized protein | SAMN05216462_2142 | Not Available | Positive | 2606462 - 2608657 | 81450.7 |
| sigma-b regulation protein rsbu (phosphoserine phosphatase) | SAMN05216462_2143 | Not Available | Positive | 2608836 - 2611013 | 82950.6 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
