Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s18 | SAMN05216462_2124 | Not Available | Negative | 2581957 - 2582223 | 10414.9 |
| small subunit ribosomal protein s6 | SAMN05216462_2125 | Not Available | Negative | 2582227 - 2582571 | 13262.1 |
| hypothetical protein | SAMN05216462_2126 | Not Available | Negative | 2582685 - 2582843 | 5675.3 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05216462_2127 | Not Available | Negative | 2582881 - 2583585 | 26956.7 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN05216462_2128 | Not Available | Negative | 2583638 - 2585200 | 59783.5 |
| elongation factor g | SAMN05216462_2129 | Not Available | Negative | 2585388 - 2587547 | 80043.1 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN05216462_2130 | Not Available | Positive | 2587663 - 2588775 | 42158.9 |
| hypothetical protein | SAMN05216462_2131 | Not Available | Negative | 2588772 - 2589704 | 35467.1 |
| putative protease | SAMN05216462_2132 | Not Available | Negative | 2589688 - 2591472 | 66664.3 |
| homoserine o-succinyltransferase | SAMN05216462_2133 | Not Available | Negative | 2591478 - 2592395 | 35790.1 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
