Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN05216462_2093 | Not Available | Positive | 2548946 - 2549182 | 8400.28 |
| murein l,d-transpeptidase ycbb/ykud | SAMN05216462_2094 | Not Available | Positive | 2549194 - 2550621 | 53788.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216462_2095 | Not Available | Positive | 2550591 - 2551088 | 19286.4 |
| hypothetical protein | SAMN05216462_2096 | Not Available | Positive | 2551132 - 2551482 | 13203.6 |
| hypothetical protein | SAMN05216462_2097 | Not Available | Positive | 2551496 - 2551936 | 17289.1 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN05216462_2098 | Not Available | Negative | 2551926 - 2552561 | 23959.1 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN05216462_2099 | Not Available | Negative | 2552563 - 2553477 | 34635.3 |
| hypothetical protein | SAMN05216462_2100 | Not Available | Negative | 2553499 - 2553933 | 17087.2 |
| virulence-associated protein e | SAMN05216462_2101 | Not Available | Positive | 2554385 - 2556541 | 83428.8 |
| leucine rich repeat-containing protein | SAMN05216462_2102 | Not Available | Positive | 2556678 - 2560022 | 121127.0 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
