Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator | SAMN05216462_2013 | Not Available | Positive | 2423747 - 2424673 | 35381.1 |
| hypothetical protein | SAMN05216462_2014 | Not Available | Negative | 2424693 - 2426333 | 60042.4 |
| hypothetical protein | SAMN05216462_2015 | Not Available | Negative | 2426352 - 2427065 | 25243.3 |
| peroxiredoxin | SAMN05216462_2016 | Not Available | Negative | 2427070 - 2427639 | 21376.8 |
| peptidase c13 family protein | SAMN05216462_2017 | Not Available | Negative | 2427649 - 2430051 | 90248.1 |
| basic membrane protein a | SAMN05216462_2018 | Not Available | Negative | 2430041 - 2431234 | 45466.7 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05216462_2019 | Not Available | Positive | 2431396 - 2431926 | 18656.8 |
| glycosyl hydrolase family 115 | SAMN05216462_2020 | Not Available | Negative | 2432010 - 2434412 | 91504.0 |
| starch-binding associating with outer membrane | SAMN05216462_2021 | Not Available | Negative | 2434529 - 2436295 | 66076.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216462_2022 | Not Available | Negative | 2436308 - 2439337 | 112538.0 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
