Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05216462_1922 | Not Available | Negative | 2286610 - 2287203 | 22030.3 |
| oxaloacetate decarboxylase, beta subunit | SAMN05216462_1923 | Not Available | Negative | 2287200 - 2288357 | 40914.4 |
| biotin-requiring enzyme | SAMN05216462_1924 | Not Available | Negative | 2288388 - 2288840 | 15792.1 |
| oxaloacetate decarboxylase, gamma chain | SAMN05216462_1925 | Not Available | Negative | 2288846 - 2289871 | 37865.6 |
| putative transport protein | SAMN05216462_1926 | Not Available | Negative | 2289912 - 2291603 | 60929.4 |
| heterodimeric methylmalonyl-coa mutase small subunit | SAMN05216462_1927 | Not Available | Positive | 2291833 - 2293695 | 69439.7 |
| heterodimeric methylmalonyl-coa mutase large subunit precursor | SAMN05216462_1928 | Not Available | Positive | 2293715 - 2295880 | 80028.9 |
| dehydrogenase (flavoprotein) | SAMN05216462_1929 | Not Available | Positive | 2295881 - 2296933 | 39911.8 |
| dehydrogenase (flavoprotein) | SAMN05216462_1930 | Not Available | Positive | 2296930 - 2297949 | 38532.5 |
| hypothetical protein | SAMN05216462_1931 | Not Available | Negative | 2298015 - 2298257 | 9369.99 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
