Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate permease, sulp family | SAMN05216462_1912 | Not Available | Positive | 2269271 - 2270971 | 60730.5 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05216462_1913 | Not Available | Negative | 2270988 - 2271635 | 24495.7 |
| 16s rrna (guanine527-n7)-methyltransferase | SAMN05216462_1914 | Not Available | Negative | 2271635 - 2272261 | 23901.0 |
| protein of unknown function | SAMN05216462_1915 | Not Available | Negative | 2272258 - 2273067 | 30901.1 |
| major facilitator superfamily protein | SAMN05216462_1916 | Not Available | Positive | 2273181 - 2274356 | 43316.5 |
| pd-(d/e)xk nuclease superfamily protein | SAMN05216462_1917 | Not Available | Negative | 2274357 - 2276996 | 100688.0 |
| atp-dependent exodnase (exonuclease v) beta subunit (contains helicase and exonuclease domains) | SAMN05216462_1918 | Not Available | Negative | 2276993 - 2280214 | 123738.0 |
| hypothetical protein | SAMN05216462_1919 | Not Available | Negative | 2280208 - 2282241 | 79825.8 |
| excinuclease abc subunit a | SAMN05216462_1920 | Not Available | Negative | 2282256 - 2285051 | 104779.0 |
| tagaturonate reductase | SAMN05216462_1921 | Not Available | Negative | 2285058 - 2286497 | 54331.6 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
