Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyceraldehyde 3-phosphate dehydrogenase | SAMN05216462_1890 | Not Available | Positive | 2248381 - 2249406 | 36426.8 |
| hypothetical protein | SAMN05216462_1891 | Not Available | Positive | 2249519 - 2250559 | 37855.7 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05216462_1892 | Not Available | Positive | 2250735 - 2251292 | 19979.6 |
| hypothetical protein | SAMN05216462_1893 | Not Available | Negative | 2251394 - 2251495 | 3477.47 |
| dna-binding protein, histone-like, putative | SAMN05216462_1894 | Not Available | Negative | 2251511 - 2252065 | 19508.8 |
| peptidase m15 | SAMN05216462_1897 | Not Available | Positive | 2253107 - 2253559 | 17030.5 |
| acyl-coa thioesterase | SAMN05216462_1898 | Not Available | Negative | 2253565 - 2253969 | 14378.3 |
| predicted membrane protein | SAMN05216462_1899 | Not Available | Positive | 2254111 - 2255754 | 61770.2 |
| hypothetical protein | SAMN05216462_1900 | Not Available | Positive | 2255793 - 2255999 | 8075.86 |
| 5'-nucleotidase | SAMN05216462_1901 | Not Available | Positive | 2255996 - 2257420 | 52384.3 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
