Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-dihydroxy-2-naphthoyl-coa synthase | SAMN05216462_1880 | Not Available | Positive | 2232995 - 2233846 | 31787.7 |
| o-succinylbenzoate synthase | SAMN05216462_1881 | Not Available | Positive | 2233843 - 2234859 | 38445.5 |
| o-succinylbenzoic acid--coa ligase | SAMN05216462_1882 | Not Available | Positive | 2234847 - 2235818 | 36455.3 |
| 3-dehydroquinate synthase | SAMN05216462_1883 | Not Available | Negative | 2235911 - 2236960 | 38496.4 |
| outer membrane protein beta-barrel family protein | SAMN05216462_1884 | Not Available | Positive | 2237117 - 2240068 | 108950.0 |
| nucleotidyl transferase | SAMN05216462_1885 | Not Available | Positive | 2240172 - 2240873 | 26367.2 |
| gmp synthase (glutamine-hydrolysing) | SAMN05216462_1886 | Not Available | Positive | 2240879 - 2242483 | 59369.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216462_1887 | Not Available | Positive | 2242691 - 2245909 | 118017.0 |
| susd family protein | SAMN05216462_1888 | Not Available | Positive | 2245923 - 2247683 | 66091.5 |
| large conductance mechanosensitive channel | SAMN05216462_1889 | Not Available | Negative | 2247722 - 2248120 | 14294.7 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
