Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o(6)-alkylguanine repair protein ybaz | SAMN05216462_1870 | Not Available | Positive | 2222867 - 2223205 | 12525.0 |
| dna alkylation repair enzyme | SAMN05216462_1871 | Not Available | Negative | 2223202 - 2223945 | 28930.4 |
| glycerol-3-phosphate dehydrogenase (nad(p)+) | SAMN05216462_1872 | Not Available | Negative | 2223975 - 2224970 | 37469.0 |
| lysyl-trna synthetase, class ii | SAMN05216462_1873 | Not Available | Negative | 2224998 - 2226725 | 65371.1 |
| glucokinase | SAMN05216462_1874 | Not Available | Positive | 2226882 - 2227862 | 35265.3 |
| glucokinase | SAMN05216462_1875 | Not Available | Positive | 2227864 - 2228853 | 35442.6 |
| glucokinase | SAMN05216462_1876 | Not Available | Positive | 2228871 - 2229854 | 34957.7 |
| uncharacterized domain 1-containing protein | SAMN05216462_1877 | Not Available | Positive | 2229895 - 2230308 | 14530.7 |
| isochorismate synthase | SAMN05216462_1878 | Not Available | Positive | 2230308 - 2231348 | 39159.8 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | SAMN05216462_1879 | Not Available | Positive | 2231335 - 2233026 | 62824.4 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
