Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape determining protein roda | SAMN05216462_1860 | Not Available | Positive | 2211636 - 2213111 | 55015.9 |
| gliding motility-associated lipoprotein gldh | SAMN05216462_1861 | Not Available | Negative | 2213097 - 2213561 | 17713.6 |
| cell fate regulator yaat, psp1 superfamily (controls sporulation, competence, biofilm development) | SAMN05216462_1862 | Not Available | Negative | 2213551 - 2214705 | 43283.9 |
| dna polymerase-3 subunit delta' | SAMN05216462_1863 | Not Available | Negative | 2214732 - 2215844 | 42676.1 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | SAMN05216462_1864 | Not Available | Negative | 2215851 - 2216816 | 36584.9 |
| bile acid:na+ symporter, bass family | SAMN05216462_1865 | Not Available | Positive | 2216876 - 2217826 | 35142.8 |
| arac-type dna-binding protein | SAMN05216462_1866 | Not Available | Negative | 2217823 - 2218275 | 17617.1 |
| glycerate kinase | SAMN05216462_1867 | Not Available | Positive | 2218419 - 2219552 | 40022.4 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN05216462_1868 | Not Available | Negative | 2219553 - 2221556 | 75824.6 |
| flavorubredoxin | SAMN05216462_1869 | Not Available | Positive | 2221703 - 2222866 | 43128.7 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
