Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit l | SAMN05216462_1850 | Not Available | Positive | 2199579 - 2201567 | 73188.7 |
| nadh-quinone oxidoreductase subunit m | SAMN05216462_1851 | Not Available | Positive | 2201611 - 2203092 | 53755.1 |
| nadh-quinone oxidoreductase subunit n | SAMN05216462_1852 | Not Available | Positive | 2203112 - 2204536 | 51437.0 |
| aspartate-ammonia ligase | SAMN05216462_1853 | Not Available | Positive | 2205037 - 2206074 | 39435.8 |
| hypothetical protein | SAMN05216462_1854 | Not Available | Positive | 2206106 - 2206621 | 19261.1 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase / imp cyclohydrolase | SAMN05216462_1855 | Not Available | Positive | 2206744 - 2207346 | 22144.6 |
| rod shape-determining protein mreb | SAMN05216462_1856 | Not Available | Positive | 2207382 - 2208404 | 37133.9 |
| rod shape-determining protein mrec | SAMN05216462_1857 | Not Available | Positive | 2208425 - 2209294 | 32635.0 |
| rod shape-determining protein mred | SAMN05216462_1858 | Not Available | Positive | 2209329 - 2209799 | 17272.8 |
| penicillin-binding protein 2 | SAMN05216462_1859 | Not Available | Positive | 2209796 - 2211655 | 69247.6 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
