Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216462_1778 | Not Available | Positive | 2125561 - 2127057 | 57658.1 |
| hypothetical protein | SAMN05216462_1779 | Not Available | Positive | 2127054 - 2127512 | 17544.4 |
| udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferase | SAMN05216462_1780 | Not Available | Positive | 2127541 - 2128605 | 39286.3 |
| cupin fold metalloprotein, wbuc family | SAMN05216462_1781 | Not Available | Positive | 2128625 - 2129029 | 15018.1 |
| udp-glucose 4-epimerase | SAMN05216462_1782 | Not Available | Positive | 2129084 - 2130130 | 38874.1 |
| udp-2-acetamido-2,6-beta-l-arabino-hexul-4-ose reductase | SAMN05216462_1783 | Not Available | Positive | 2130132 - 2131331 | 45025.7 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolysing) | SAMN05216462_1784 | Not Available | Positive | 2131337 - 2132503 | 43792.7 |
| cupin fold metalloprotein, wbuc family | SAMN05216462_1785 | Not Available | Positive | 2132643 - 2133041 | 15066.2 |
| mth538 tir-like domain | SAMN05216462_1786 | Not Available | Positive | 2133366 - 2133977 | 23412.5 |
| tir domain-containing protein | SAMN05216462_1787 | Not Available | Positive | 2133979 - 2135166 | 46006.2 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
