Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05216462_0165 | Not Available | Positive | 207239 - 208369 | 42075.2 |
| beta-galactosidase | SAMN05216462_0166 | Not Available | Positive | 208507 - 210927 | 91191.9 |
| 5'-phosphate synthase pdxt subunit | SAMN05216462_0167 | Not Available | Negative | 210911 - 211456 | 19887.2 |
| pyridoxal 5'-phosphate synthase pdxs subunit | SAMN05216462_0168 | Not Available | Negative | 211456 - 212331 | 31419.2 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | SAMN05216462_0169 | Not Available | Negative | 212339 - 213265 | 33822.9 |
| carboxypepd_reg-like domain-containing protein | SAMN05216462_0170 | Not Available | Negative | 213330 - 216233 | 111591.0 |
| transcriptional regulator, laci family | SAMN05216462_0171 | Not Available | Negative | 216356 - 217354 | 37426.3 |
| serine phosphatase rsbu, regulator of sigma subunit | SAMN05216462_0172 | Not Available | Negative | 217694 - 219787 | 78666.7 |
| hemolysin iii | SAMN05216462_0174 | Not Available | Negative | 221402 - 222049 | 24383.9 |
| polygalacturonase | SAMN05216462_0175 | Not Available | Negative | 222097 - 223557 | 54261.1 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
