Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione peroxidase | SAMN05216462_0155 | Not Available | Negative | 196561 - 197139 | 21706.8 |
| nitroreductase | SAMN05216462_0156 | Not Available | Negative | 197236 - 197853 | 22822.1 |
| oxygen-dependent protoporphyrinogen oxidase | SAMN05216462_0157 | Not Available | Negative | 197962 - 199317 | 49837.2 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN05216462_0158 | Not Available | Negative | 199320 - 200720 | 52503.4 |
| transcriptional regulator, arac family | SAMN05216462_0159 | Not Available | Negative | 200738 - 201601 | 33686.5 |
| l-rhamnose mutarotase | SAMN05216462_0160 | Not Available | Positive | 201849 - 202244 | 15672.0 |
| l-fucose isomerase | SAMN05216462_0161 | Not Available | Positive | 202231 - 204057 | 67414.4 |
| alpha-l-fucosidase | SAMN05216462_0162 | Not Available | Positive | 204087 - 205706 | 61814.8 |
| hypothetical protein | SAMN05216462_0163 | Not Available | Negative | 205950 - 206366 | 15743.0 |
| hypothetical protein | SAMN05216462_0164 | Not Available | Negative | 206548 - 206847 | 12036.6 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
