Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05216462_1635 | Not Available | Negative | 1962621 - 1965617 | 110708.0 |
| hypothetical protein | SAMN05216462_1636 | Not Available | Negative | 1965810 - 1965920 | 4137.97 |
| hypothetical protein | SAMN05216462_1637 | Not Available | Negative | 1965936 - 1966304 | 14444.7 |
| hypothetical protein | SAMN05216462_1638 | Not Available | Negative | 1966333 - 1968576 | 84718.2 |
| lysozyme | SAMN05216462_1639 | Not Available | Negative | 1968606 - 1969070 | 17753.3 |
| phage regulatory protein, rha family | SAMN05216462_1640 | Not Available | Negative | 1969139 - 1969828 | 26641.3 |
| peptidase s24-like | SAMN05216462_1641 | Not Available | Negative | 1970195 - 1971007 | 30666.1 |
| trna(fmet)-specific endonuclease vapc | SAMN05216462_1642 | Not Available | Negative | 1971142 - 1971543 | 14982.1 |
| hypothetical protein | SAMN05216462_1643 | Not Available | Negative | 1971540 - 1971782 | 8983.63 |
| dna-binding protein, histone-like, putative | SAMN05216462_1644 | Not Available | Positive | 1972317 - 1972856 | 18998.3 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
