Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase-3 subunit alpha | SAMN05216462_1625 | Not Available | Negative | 1948050 - 1951781 | 140796.0 |
| phosphatidylserine decarboxylase | SAMN05216462_1626 | Not Available | Positive | 1951925 - 1952614 | 25895.4 |
| cdp-diacylglycerol---serine o-phosphatidyltransferase | SAMN05216462_1627 | Not Available | Positive | 1952621 - 1953325 | 26007.5 |
| protein of unknown function | SAMN05216462_1628 | Not Available | Positive | 1953341 - 1953751 | 15752.7 |
| uridylate kinase | SAMN05216462_1629 | Not Available | Negative | 1953756 - 1954466 | 25502.1 |
| bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligase | SAMN05216462_1630 | Not Available | Negative | 1954516 - 1955229 | 26922.4 |
| trna(adenine34) deaminase | SAMN05216462_1631 | Not Available | Positive | 1955345 - 1955797 | 16609.0 |
| susd family protein | SAMN05216462_1632 | Not Available | Negative | 1955903 - 1957531 | 60575.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216462_1633 | Not Available | Negative | 1957580 - 1960774 | 118031.0 |
| starch-binding associating with outer membrane | SAMN05216462_1634 | Not Available | Negative | 1961126 - 1962601 | 53916.1 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
