Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate transport system substrate-binding protein | SAMN05216462_1603 | Not Available | Negative | 1926996 - 1927955 | 36140.4 |
| protein tonb | SAMN05216462_1604 | Not Available | Negative | 1927974 - 1928807 | 30702.7 |
| biopolymer transport protein exbd/tolr | SAMN05216462_1605 | Not Available | Negative | 1928830 - 1929495 | 24931.3 |
| biopolymer transport protein exbd/tolr | SAMN05216462_1606 | Not Available | Negative | 1929503 - 1930120 | 23094.2 |
| biopolymer transport protein exbb | SAMN05216462_1607 | Not Available | Negative | 1930163 - 1930993 | 29038.3 |
| aspartate aminotransferase | SAMN05216462_1608 | Not Available | Negative | 1931111 - 1932325 | 44639.7 |
| 3,4-dihydroxy 2-butanone 4-phosphate synthase / gtp cyclohydrolase ii | SAMN05216462_1609 | Not Available | Negative | 1932407 - 1933618 | 45236.7 |
| lipopolysaccharide export system permease protein | SAMN05216462_1610 | Not Available | Negative | 1933647 - 1935635 | 75896.8 |
| activator of hsp90 atpase homolog 1-like protein | SAMN05216462_1611 | Not Available | Negative | 1935723 - 1936127 | 15686.0 |
| hypothetical protein | SAMN05216462_1613 | Not Available | Positive | 1936433 - 1937974 | 57132.8 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
