Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinogalactan endo-1,4-beta-galactosidase | SAMN05216462_1593 | Not Available | Negative | 1919208 - 1920464 | 47721.5 |
| hypothetical protein | SAMN05216462_1594 | Not Available | Negative | 1920489 - 1920677 | 7003.33 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase / imp cyclohydrolase | SAMN05216462_1595 | Not Available | Negative | 1920712 - 1921896 | 44021.4 |
| hypothetical protein | SAMN05216462_1596 | Not Available | Positive | 1921975 - 1922127 | 5859.21 |
| large subunit ribosomal protein l19 | SAMN05216462_1597 | Not Available | Negative | 1922170 - 1922529 | 13462.7 |
| 5'-nucleotidase, c-terminal domain | SAMN05216462_1598 | Not Available | Positive | 1922703 - 1923467 | 28078.8 |
| 5'-nucleotidase | SAMN05216462_1599 | Not Available | Positive | 1923471 - 1924313 | 31550.5 |
| probable protein-translocating porin port | SAMN05216462_1600 | Not Available | Negative | 1924316 - 1925041 | 27747.0 |
| 4fe-4s binding domain-containing protein | SAMN05216462_1601 | Not Available | Positive | 1925195 - 1925362 | 5648.64 |
| tetratricopeptide repeat-containing protein | SAMN05216462_1602 | Not Available | Negative | 1925496 - 1926920 | 53361.4 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
