Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase, small subunit | SAMN05216462_1416 | Not Available | Negative | 1721939 - 1722535 | 22365.3 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN05216462_1417 | Not Available | Negative | 1722546 - 1723931 | 50006.0 |
| 2-isopropylmalate synthase | SAMN05216462_1418 | Not Available | Negative | 1723932 - 1725437 | 54818.4 |
| lysozyme | SAMN05216462_1419 | Not Available | Positive | 1725864 - 1727180 | 49888.5 |
| 23s rrna (pseudouridine1915-n3)-methyltransferase | SAMN05216462_1420 | Not Available | Positive | 1727183 - 1727653 | 18019.8 |
| hypothetical protein | SAMN05216462_1421 | Not Available | Negative | 1727654 - 1728529 | 32360.8 |
| hypothetical protein | SAMN05216462_1422 | Not Available | Negative | 1728587 - 1729357 | 28865.8 |
| phosphate starvation-inducible protein phoh | SAMN05216462_1423 | Not Available | Positive | 1729436 - 1730398 | 36127.3 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | SAMN05216462_1424 | Not Available | Positive | 1730430 - 1731386 | 36497.5 |
| demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | SAMN05216462_1425 | Not Available | Positive | 1731388 - 1732119 | 27431.2 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
