Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper chaperone copz | SAMN05216462_0125 | Not Available | Positive | 159466 - 159795 | 12233.9 |
| na+/h+-dicarboxylate symporter | SAMN05216462_0126 | Not Available | Negative | 160064 - 161272 | 42790.1 |
| starch-binding associating with outer membrane | SAMN05216462_0127 | Not Available | Negative | 161366 - 162796 | 52940.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216462_0128 | Not Available | Negative | 162815 - 166045 | 118064.0 |
| trna a37 threonylcarbamoyladenosine dehydratase | SAMN05216462_0129 | Not Available | Positive | 166299 - 167108 | 29982.5 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05216462_0130 | Not Available | Positive | 167239 - 167880 | 24569.3 |
| protein of unknown function | SAMN05216462_0131 | Not Available | Positive | 168012 - 169754 | 59088.7 |
| histidine kinase | SAMN05216462_0132 | Not Available | Positive | 169800 - 170963 | 45905.2 |
| two component transcriptional regulator, lyttr family | SAMN05216462_0133 | Not Available | Positive | 170960 - 171679 | 27231.1 |
| hypothetical protein | SAMN05216462_0134 | Not Available | Positive | 171815 - 173071 | 47003.7 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
