Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| queuine trna-ribosyltransferase | SAMN05216462_1190 | Not Available | Positive | 1494719 - 1495861 | 43098.8 |
| lipopolysaccharide export system permease protein | SAMN05216462_1191 | Not Available | Positive | 1495858 - 1497039 | 44813.1 |
| superfamily ii dna and rna helicase | SAMN05216462_1192 | Not Available | Positive | 1497039 - 1498295 | 47302.8 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMN05216462_1193 | Not Available | Positive | 1498292 - 1499125 | 30802.1 |
| udp-glucose 4-epimerase | SAMN05216462_1194 | Not Available | Positive | 1499137 - 1500177 | 38485.3 |
| hypothetical protein | SAMN05216462_1195 | Not Available | Negative | 1500494 - 1500892 | 15063.1 |
| nitt/taut family transport system substrate-binding protein | SAMN05216462_1196 | Not Available | Positive | 1500953 - 1501897 | 35686.5 |
| sigma-b regulation protein rsbu (phosphoserine phosphatase) | SAMN05216462_1197 | Not Available | Positive | 1501894 - 1503927 | 77278.8 |
| putative mfs transporter, agza family, xanthine/uracil permease | SAMN05216462_1198 | Not Available | Negative | 1504521 - 1505798 | 46067.9 |
| signal transduction histidine kinase | SAMN05216462_1199 | Not Available | Negative | 1505795 - 1506901 | 40883.8 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
