Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad+ synthase (glutamine-hydrolysing) | SAMN05216462_1139 | Not Available | Positive | 1425701 - 1427632 | 71124.5 |
| atp-dependent clp protease atp-binding subunit clpc | SAMN05216462_1140 | Not Available | Negative | 1427645 - 1430185 | 93949.5 |
| dna gyrase subunit a | SAMN05216462_1141 | Not Available | Positive | 1430430 - 1432964 | 94747.2 |
| tetratricopeptide repeat-containing protein | SAMN05216462_1142 | Not Available | Positive | 1433049 - 1434248 | 44061.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216462_1143 | Not Available | Positive | 1434579 - 1437890 | 122923.0 |
| susd family protein | SAMN05216462_1144 | Not Available | Positive | 1437932 - 1439596 | 62977.9 |
| substrate import-associated zinc metallohydrolase lipoprotein | SAMN05216462_1145 | Not Available | Positive | 1439600 - 1440556 | 36942.3 |
| putative binding domain-containing protein, n-terminal | SAMN05216462_1146 | Not Available | Positive | 1440575 - 1442092 | 55357.6 |
| putative binding domain-containing protein, n-terminal | SAMN05216462_1147 | Not Available | Positive | 1442107 - 1443183 | 38636.5 |
| hypothetical protein | SAMN05216462_1148 | Not Available | Negative | 1443335 - 1443436 | 3383.33 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
