Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | SAMN05216462_0105 | Not Available | Positive | 136728 - 137258 | 19732.9 |
| 2-iminobutanoate/2-iminopropanoate deaminase | SAMN05216462_0106 | Not Available | Negative | 137347 - 137724 | 13094.7 |
| proteasome lid subunit rpn8/rpn11, contains jab1/mpn metalloenzyme (jamm) motif | SAMN05216462_0107 | Not Available | Negative | 137750 - 138148 | 14962.6 |
| molybdopterin or thiamine biosynthesis adenylyltransferase | SAMN05216462_0108 | Not Available | Negative | 138152 - 138961 | 29360.3 |
| sulfur carrier protein | SAMN05216462_0109 | Not Available | Negative | 138958 - 139170 | 7870.34 |
| cysteine desulfurase / selenocysteine lyase | SAMN05216462_0110 | Not Available | Negative | 139175 - 140704 | 56148.5 |
| cyclic nucleotide-binding domain-containing protein | SAMN05216462_0111 | Not Available | Negative | 140705 - 142144 | 54007.5 |
| tusa-related sulfurtransferase | SAMN05216462_0112 | Not Available | Negative | 142153 - 142377 | 8273.11 |
| peroxiredoxin family protein | SAMN05216462_0113 | Not Available | Negative | 142388 - 142867 | 17317.3 |
| o-acetylhomoserine (thiol)-lyase | SAMN05216462_0114 | Not Available | Negative | 142873 - 144048 | 42878.5 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
