Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein tigr03905 | SAMN05216462_1087 | Not Available | Positive | 1366207 - 1366479 | 9749.8 |
| uncharacterized protein, yigz family | SAMN05216462_1089 | Not Available | Negative | 1366756 - 1367340 | 22181.5 |
| carbamoyl-phosphate synthase large subunit | SAMN05216462_1090 | Not Available | Negative | 1367358 - 1370618 | 120495.0 |
| hypothetical protein | SAMN05216462_1091 | Not Available | Negative | 1370778 - 1371287 | 19242.4 |
| ribosomal protein l11 methyltransferase | SAMN05216462_1092 | Not Available | Negative | 1371569 - 1372411 | 31344.0 |
| hypothetical protein | SAMN05216462_1093 | Not Available | Positive | 1372540 - 1373511 | 36259.2 |
| hypothetical protein | SAMN05216462_1094 | Not Available | Positive | 1373553 - 1375124 | 57860.9 |
| indolepyruvate ferredoxin oxidoreductase alpha subunit | SAMN05216462_1095 | Not Available | Positive | 1375337 - 1376944 | 58615.4 |
| indolepyruvate ferredoxin oxidoreductase beta subunit | SAMN05216462_1096 | Not Available | Positive | 1376997 - 1377569 | 20353.8 |
| aspartate/methionine/tyrosine aminotransferase | SAMN05216462_1097 | Not Available | Positive | 1377656 - 1378966 | 48675.6 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
