Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s18 acetylase rimi | SAMN05216462_1036 | Not Available | Positive | 1303129 - 1303623 | 19083.7 |
| radical sam superfamily protein | SAMN05216462_1037 | Not Available | Positive | 1303651 - 1304541 | 33457.1 |
| outer membrane receptor proteins, mostly fe transport | SAMN05216462_1038 | Not Available | Positive | 1304563 - 1306929 | 90312.4 |
| c-terminal processing protease ctpa/prc, contains a pdz domain | SAMN05216462_1039 | Not Available | Positive | 1307184 - 1310402 | 121822.0 |
| nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase | SAMN05216462_1040 | Not Available | Negative | 1310399 - 1311421 | 36989.1 |
| adenosylcobinamide kinase /adenosylcobinamide-phosphate guanylyltransferase | SAMN05216462_1041 | Not Available | Negative | 1311423 - 1311920 | 18849.5 |
| cobalamin-5'-phosphate synthase | SAMN05216462_1042 | Not Available | Negative | 1311917 - 1312717 | 29938.6 |
| iron complex transport system substrate-binding protein | SAMN05216462_1043 | Not Available | Positive | 1312773 - 1313879 | 41051.4 |
| iron complex transport system permease protein | SAMN05216462_1044 | Not Available | Positive | 1313876 - 1314895 | 35453.2 |
| cobalt-precorrin-5b (c1)-methyltransferase | SAMN05216462_1045 | Not Available | Negative | 1314819 - 1316588 | 64020.9 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
