Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea quercina |
| Strain | strain ATCC 29281 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3257 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxic protein syme | SAMN02982996_03385 | Not Available | Negative | 3749332 - 3749487 | 5836.11 |
| rhs repeat-associated core domain-containing protein | SAMN02982996_03386 | Not Available | Positive | 3749878 - 3751186 | 48517.3 |
| smi1 / knr4 family (sukh-1) | SAMN02982996_03387 | Not Available | Positive | 3751190 - 3751720 | 20024.2 |
| hypothetical protein | SAMN02982996_03388 | Not Available | Positive | 3751969 - 3752253 | 10939.6 |
| yd repeat-containing protein | SAMN02982996_03389 | Not Available | Positive | 3752272 - 3752643 | 13914.2 |
| yd repeat-containing protein | SAMN02982996_03390 | Not Available | Positive | 3752680 - 3752982 | 11816.5 |
| hypothetical protein | SAMN02982996_03391 | Not Available | Positive | 3753836 - 3754153 | 11689.5 |
| putative transposase | SAMN02982996_03392 | Not Available | Negative | 3754150 - 3755130 | 37998.9 |
| transposase | SAMN02982996_03393 | Not Available | Negative | 3755157 - 3755639 | 17905.4 |
| type vi secretion system secreted protein vgrg | SAMN02982996_03394 | Not Available | Positive | 3755703 - 3756428 | 25662.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
