Lonsdalea quercina strain ATCC 29281

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Lonsdalea

Description

Lonsdalea quercina strain ATCC 29281 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain has been cataloged with the accession number FNQS00000000.1 and possesses a single replicon, indicating a streamlined genomic structure. As an aerobic organism, Lonsdalea quercina relies on oxygen for its metabolic processes, which is typical for many bacteria within its taxonomic group. The Gram-negative classification suggests the presence of a thin peptidoglycan layer surrounded by an outer membrane, a trait that can influence its interactions with the environment and resistance to certain antibiotics. Biologically, Lonsdalea quercina may play a significant role in its ecological niche, particularly in relation to plant interactions. Given the genus Lonsdalea is often associated with specific plant substrates, understanding its characteristics could provide insights into its potential roles in nutrient cycling or symbiotic relationships within ecosystems. The aerobic nature of this strain suggests it may contribute to the decomposition of organic materials in oxygen-rich environments, thus influencing soil health and fertility.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusLonsdalea
SpeciesLonsdalea quercina
Strainstrain ATCC 29281

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lonsdalea quercina strain ATCC 29281 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3257 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
integraseSAMN02982996_03165Not AvailablePositive3531749 - 353299947533.5
hypothetical proteinSAMN02982996_03166Not AvailableNegative3533486 - 35336445881.06
homeodomain-like domain-containing proteinSAMN02982996_03167Not AvailableNegative3533716 - 353400010511.5
transposaseSAMN02982996_03168Not AvailableNegative3534048 - 353453018253.9
hypothetical proteinSAMN02982996_03169Not AvailableNegative3534577 - 353507418398.2
hypothetical proteinSAMN02982996_03170Not AvailableNegative3535083 - 353561019397.9
hypothetical proteinSAMN02982996_03171Not AvailableNegative3536604 - 353721522867.2
transposaseSAMN02982996_03172Not AvailableNegative3537342 - 35375096064.33
hypothetical proteinSAMN02982996_03173Not AvailablePositive3538032 - 353950455964.2
integrase core domain-containing proteinSAMN02982996_03174Not AvailableNegative3540089 - 35403319693.56

Displaying genes 3121 – 3130 of 3359 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.