Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea quercina |
| Strain | strain ATCC 29281 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3257 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein vasd | SAMN02982996_02920 | Not Available | Negative | 3258077 - 3258592 | 19063.8 |
| fha domain protein | SAMN02982996_02921 | Not Available | Negative | 3258592 - 3259830 | 46244.1 |
| type vi secretion system protein imph | SAMN02982996_02922 | Not Available | Negative | 3259833 - 3260831 | 37713.0 |
| type vi secretion system protein impg | SAMN02982996_02923 | Not Available | Negative | 3260795 - 3262561 | 67075.1 |
| type vi secretion system protein | SAMN02982996_02924 | Not Available | Negative | 3262564 - 3262998 | 16364.2 |
| type vi secretion system protein impc | SAMN02982996_02925 | Not Available | Negative | 3263005 - 3264483 | 55397.8 |
| type vi secretion system protein impb | SAMN02982996_02926 | Not Available | Negative | 3264514 - 3265017 | 18522.2 |
| type vi secretion system effector, hcp1 family | SAMN02982996_02927 | Not Available | Positive | 3266644 - 3266897 | 9278.1 |
| rhs repeat-associated core domain-containing protein | SAMN02982996_02928 | Not Available | Positive | 3266898 - 3268210 | 48914.1 |
| hypothetical protein | SAMN02982996_02929 | Not Available | Positive | 3268212 - 3268691 | 18157.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
