Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea quercina |
| Strain | strain ATCC 29281 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3257 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma e regulatory protein, mucb/rseb | SAMN02982996_02532 | Not Available | Negative | 2850185 - 2851135 | 35218.2 |
| sigma-e factor negative regulatory protein rsea | SAMN02982996_02533 | Not Available | Negative | 2851135 - 2851791 | 24068.2 |
| rna polymerase, sigma-24 subunit, rpoe | SAMN02982996_02534 | Not Available | Negative | 2851843 - 2852418 | 21781.0 |
| trna1val (adenine37-n6)-methyltransferase | SAMN02982996_02535 | Not Available | Negative | 2852691 - 2853434 | 27040.4 |
| atp-dependent rna helicase srmb | SAMN02982996_02536 | Not Available | Positive | 2853567 - 2854898 | 49886.2 |
| autonomous glycyl radical cofactor | SAMN02982996_02537 | Not Available | Negative | 2855063 - 2855446 | 14515.1 |
| uracil-dna glycosylase | SAMN02982996_02538 | Not Available | Positive | 2855802 - 2856488 | 25787.7 |
| Trna-ala | Not Available | Not Available | Positive | 2856603 - 2856678 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 2856719 - 2856794 | Not Available |
| glutamyl-trna synthetase | SAMN02982996_02541 | Not Available | Negative | 2857111 - 2858526 | 53334.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
