Lonsdalea quercina strain ATCC 29281

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Lonsdalea

Description

Lonsdalea quercina strain ATCC 29281 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain has been cataloged with the accession number FNQS00000000.1 and possesses a single replicon, indicating a streamlined genomic structure. As an aerobic organism, Lonsdalea quercina relies on oxygen for its metabolic processes, which is typical for many bacteria within its taxonomic group. The Gram-negative classification suggests the presence of a thin peptidoglycan layer surrounded by an outer membrane, a trait that can influence its interactions with the environment and resistance to certain antibiotics. Biologically, Lonsdalea quercina may play a significant role in its ecological niche, particularly in relation to plant interactions. Given the genus Lonsdalea is often associated with specific plant substrates, understanding its characteristics could provide insights into its potential roles in nutrient cycling or symbiotic relationships within ecosystems. The aerobic nature of this strain suggests it may contribute to the decomposition of organic materials in oxygen-rich environments, thus influencing soil health and fertility.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusLonsdalea
SpeciesLonsdalea quercina
Strainstrain ATCC 29281

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lonsdalea quercina strain ATCC 29281 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3257 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamate synthase small subunit family proteinSAMN02982996_01969Not AvailableNegative2223900 - 222590672978.5
fusaric acid resistance protein-likeSAMN02982996_01970Not AvailableNegative2226366 - 222746641680.5
eama domain-containing membrane protein rardSAMN02982996_01971Not AvailableNegative2227917 - 222884033063.8
polar amino acid transport system substrate-binding proteinSAMN02982996_01972Not AvailablePositive2229179 - 223002130370.1
sensor histidine kinase inhibitor, kipi familySAMN02982996_01973Not AvailablePositive2230025 - 223073525390.7
biotin-dependent carboxylase uncharacterized domain-containing proteinSAMN02982996_01974Not AvailablePositive2230732 - 223172134613.5
aspartate aminotransferaseSAMN02982996_01975Not AvailableNegative2231988 - 223319043663.3
lysr family transcriptional regulator, nitrogen assimilation regulatory proteinSAMN02982996_01976Not AvailablePositive2233572 - 223449533511.2
biotin-requiring enzymeSAMN02982996_01977Not AvailablePositive2234749 - 223517715295.4
upf0271 proteinSAMN02982996_01978Not AvailablePositive2235180 - 223597728718.5

Displaying genes 1981 – 1990 of 3359 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.