Lonsdalea quercina strain ATCC 29281

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Lonsdalea

Description

Lonsdalea quercina strain ATCC 29281 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain has been cataloged with the accession number FNQS00000000.1 and possesses a single replicon, indicating a streamlined genomic structure. As an aerobic organism, Lonsdalea quercina relies on oxygen for its metabolic processes, which is typical for many bacteria within its taxonomic group. The Gram-negative classification suggests the presence of a thin peptidoglycan layer surrounded by an outer membrane, a trait that can influence its interactions with the environment and resistance to certain antibiotics. Biologically, Lonsdalea quercina may play a significant role in its ecological niche, particularly in relation to plant interactions. Given the genus Lonsdalea is often associated with specific plant substrates, understanding its characteristics could provide insights into its potential roles in nutrient cycling or symbiotic relationships within ecosystems. The aerobic nature of this strain suggests it may contribute to the decomposition of organic materials in oxygen-rich environments, thus influencing soil health and fertility.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusLonsdalea
SpeciesLonsdalea quercina
Strainstrain ATCC 29281

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lonsdalea quercina strain ATCC 29281 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3257 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide/nickel transport system permease proteinSAMN02982996_01888Not AvailableNegative2142566 - 214351334368.3
peptide/nickel transport system substrate-binding proteinSAMN02982996_01889Not AvailableNegative2143595 - 214510655190.6
dna-binding transcriptional regulator, fadr familySAMN02982996_01890Not AvailableNegative2145189 - 214592928112.5
hypothetical proteinSAMN02982996_01891Not AvailableNegative2146048 - 214635911858.6
purine-cytosine permeaseSAMN02982996_01892Not AvailableNegative2146356 - 214767248302.3
biotin-dependent carboxylase uncharacterized domain-containing proteinSAMN02982996_01893Not AvailableNegative2147867 - 214885335006.3
allophanate hydrolase subunit 1SAMN02982996_01894Not AvailableNegative2148843 - 214972432675.8
acetyl-coa carboxylase, biotin carboxylase subunitSAMN02982996_01895Not AvailableNegative2149726 - 215109949122.6
biotin-requiring enzymeSAMN02982996_01896Not AvailableNegative2151159 - 21514079138.97
upf0271 proteinSAMN02982996_01897Not AvailableNegative2151437 - 215221328668.6

Displaying genes 1901 – 1910 of 3359 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.