Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix caldifontis |
| Strain | strain DSM 21228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
975519 bp
Thymine Count
966984 bp
Guanine Count
988017 bp
Cytosine Count
1001078 bp
Genome Length
3936903 bp
Protein-coding Genes
3767 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 1 - 115 | 18.01 |
| hypothetical protein | SAMN05660964_00001 | Not Available | Negative | 1 - 244 | 8160.44 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 247 - 3077 | 18.01 |
| mfs transporter, pat family, beta-lactamase induction signal transducer ampg | SAMN05660964_00002 | Not Available | Positive | 608 - 2152 | 56020.4 |
| glycosyltransferase sugar-binding region containing dxd motif-containing protein | SAMN05660964_00003 | Not Available | Negative | 2079 - 2909 | 32068.1 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 3634 - 5125 | 18.01 |
| n-acetylglutamate synthase | SAMN05660964_00004 | Not Available | Negative | 3010 - 4290 | 47571.4 |
| phosphoheptose isomerase | SAMN05660964_00005 | Not Available | Negative | 4296 - 4886 | 21004.1 |
| putative endonuclease | SAMN05660964_00006 | Not Available | Negative | 4890 - 5255 | 13897.7 |
| lppc putative lipoprotein | SAMN05660964_00007 | Not Available | Negative | 5245 - 6756 | 53713.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
