Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix caldifontis |
| Strain | strain DSM 21228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
975519 bp
Thymine Count
966984 bp
Guanine Count
988017 bp
Cytosine Count
1001078 bp
Genome Length
3936903 bp
Protein-coding Genes
3767 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN05660964_00068 | Not Available | Positive | 65555 - 66589 | 38341.9 |
| hypothetical protein | SAMN05660964_00069 | Not Available | Negative | 66586 - 66798 | 8093.84 |
| hpt domain-containing protein | SAMN05660964_00070 | Not Available | Negative | 67006 - 67329 | 11673.3 |
| response regulator receiver domain-containing protein | SAMN05660964_00071 | Not Available | Negative | 67310 - 69646 | 87222.6 |
| ethylbenzene dehydrogenase | SAMN05660964_00072 | Not Available | Negative | 69673 - 70518 | 31982.8 |
| Trna-ser | Not Available | Not Available | Positive | 70683 - 70770 | Not Available |
| general secretion pathway protein l | SAMN05660964_00074 | Not Available | Positive | 70955 - 72010 | 39837.8 |
| type ii secretion system (t2ss), protein m subtype b | SAMN05660964_00075 | Not Available | Positive | 72000 - 72608 | 22944.8 |
| hypothetical protein | SAMN05660964_00076 | Not Available | Positive | 72589 - 73362 | 27290.8 |
| general secretion pathway protein d | SAMN05660964_00077 | Not Available | Positive | 73540 - 75765 | 78818.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
