Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix caldifontis |
| Strain | strain DSM 21228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
975519 bp
Thymine Count
966984 bp
Guanine Count
988017 bp
Cytosine Count
1001078 bp
Genome Length
3936903 bp
Protein-coding Genes
3767 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihaem cytochrome c | SAMN05660964_00058 | Not Available | Positive | 57159 - 57680 | 18837.3 |
| cytochrome b | SAMN05660964_00059 | Not Available | Positive | 57692 - 58303 | 22112.5 |
| hypothetical protein | SAMN05660964_00060 | Not Available | Positive | 58388 - 59143 | 26574.1 |
| hypothetical protein | SAMN05660964_00061 | Not Available | Positive | 59191 - 59883 | 24992.8 |
| uncharacterized conserved protein, duf302 family | SAMN05660964_00062 | Not Available | Negative | 59930 - 60442 | 17737.3 |
| uncharacterized conserved protein, duf302 family | SAMN05660964_00063 | Not Available | Negative | 60454 - 60966 | 17843.8 |
| hypothetical protein | SAMN05660964_00064 | Not Available | Positive | 61300 - 62847 | 55064.4 |
| hypothetical protein | SAMN05660964_00065 | Not Available | Positive | 62930 - 63586 | 22973.0 |
| hydrogenase small subunit | SAMN05660964_00066 | Not Available | Positive | 63665 - 64855 | 42862.2 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05660964_00067 | Not Available | Positive | 64869 - 65558 | 26532.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
