Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix caldifontis |
| Strain | strain DSM 21228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
975519 bp
Thymine Count
966984 bp
Guanine Count
988017 bp
Cytosine Count
1001078 bp
Genome Length
3936903 bp
Protein-coding Genes
3767 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05660964_00048 | Not Available | Negative | 47573 - 47872 | 11637.0 |
| hypothetical protein | SAMN05660964_00049 | Not Available | Negative | 47991 - 48374 | 14051.0 |
| cobalt-zinc-cadmium resistance protein czca | SAMN05660964_00050 | Not Available | Negative | 48394 - 51486 | 111750.0 |
| rnd family efflux transporter, mfp subunit | SAMN05660964_00051 | Not Available | Negative | 51490 - 52566 | 37626.0 |
| regulatory protein, luxr family | SAMN05660964_00052 | Not Available | Negative | 52671 - 53174 | 19306.4 |
| cytochrome c553 | SAMN05660964_00053 | Not Available | Positive | 53381 - 53758 | 13138.4 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05660964_00054 | Not Available | Positive | 53758 - 55011 | 44404.7 |
| cytochrome c5 | SAMN05660964_00055 | Not Available | Negative | 55440 - 55994 | 20174.1 |
| regulatory protein, luxr family | SAMN05660964_00056 | Not Available | Negative | 56045 - 56569 | 20153.3 |
| protein of unknown function | SAMN05660964_00057 | Not Available | Positive | 56735 - 57151 | 15521.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
