Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix caldifontis |
| Strain | strain DSM 21228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
975519 bp
Thymine Count
966984 bp
Guanine Count
988017 bp
Cytosine Count
1001078 bp
Genome Length
3936903 bp
Protein-coding Genes
3767 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome partitioning protein | SAMN05660964_00038 | Not Available | Positive | 38542 - 39165 | 22700.5 |
| hypothetical protein | SAMN05660964_00039 | Not Available | Positive | 39206 - 39736 | 19311.2 |
| hypothetical protein | SAMN05660964_00040 | Not Available | Positive | 39948 - 40775 | 30055.5 |
| dynamin family protein | SAMN05660964_00041 | Not Available | Positive | 40778 - 42217 | 53774.6 |
| thiamine biosynthesis lipoprotein | SAMN05660964_00042 | Not Available | Positive | 42171 - 43223 | 38427.8 |
| hypothetical protein | SAMN05660964_00043 | Not Available | Positive | 43387 - 44154 | 27520.0 |
| hypothetical protein | SAMN05660964_00044 | Not Available | Positive | 44329 - 45144 | 28069.8 |
| protein of unknown function | SAMN05660964_00045 | Not Available | Positive | 45334 - 46146 | 28074.4 |
| hypothetical protein | SAMN05660964_00046 | Not Available | Positive | 46392 - 46961 | 21187.8 |
| ribosomal large subunit pseudouridine synthase e | SAMN05660964_00047 | Not Available | Positive | 47033 - 47569 | 20399.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
