Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix caldifontis |
| Strain | strain DSM 21228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
975519 bp
Thymine Count
966984 bp
Guanine Count
988017 bp
Cytosine Count
1001078 bp
Genome Length
3936903 bp
Protein-coding Genes
3767 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00255 family protein | SAMN05660964_00028 | Not Available | Negative | 28108 - 28974 | 33447.0 |
| comf family protein | SAMN05660964_00029 | Not Available | Negative | 29006 - 29698 | 25833.1 |
| rhomboid family glygly-cterm serine protease | SAMN05660964_00030 | Not Available | Negative | 29695 - 30294 | 22392.7 |
| general secretion pathway protein g | SAMN05660964_00031 | Not Available | Positive | 30352 - 30774 | 15324.5 |
| type ii secretion system protein h | SAMN05660964_00032 | Not Available | Positive | 30749 - 31279 | 19995.1 |
| general secretion pathway protein i | SAMN05660964_00033 | Not Available | Positive | 31281 - 31670 | 14176.1 |
| general secretion pathway protein j | SAMN05660964_00034 | Not Available | Positive | 31667 - 32290 | 23411.8 |
| rnd family efflux transporter, mfp subunit | SAMN05660964_00035 | Not Available | Positive | 32497 - 33606 | 39375.6 |
| multidrug efflux pump subunit acrb | SAMN05660964_00036 | Not Available | Positive | 33646 - 37458 | 137832.0 |
| hypothetical protein | SAMN05660964_00037 | Not Available | Positive | 37477 - 38472 | 32647.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
