Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix caldifontis |
| Strain | strain DSM 21228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
975519 bp
Thymine Count
966984 bp
Guanine Count
988017 bp
Cytosine Count
1001078 bp
Genome Length
3936903 bp
Protein-coding Genes
3767 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| k(+)-stimulated pyrophosphate-energized sodium pump | SAMN05660964_00008 | Not Available | Positive | 7027 - 9048 | 68720.5 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN05660964_00009 | Not Available | Positive | 9126 - 9968 | 30143.5 |
| hypothetical protein | SAMN05660964_00010 | Not Available | Negative | 9965 - 10576 | 22886.0 |
| inorganic pyrophosphatase | SAMN05660964_00011 | Not Available | Positive | 10680 - 11234 | 20574.7 |
| penicillin-binding protein 2 | SAMN05660964_00012 | Not Available | Positive | 11290 - 13296 | 74162.0 |
| rod shape determining protein roda | SAMN05660964_00013 | Not Available | Positive | 13289 - 14401 | 40912.4 |
| membrane-bound lytic murein transglycosylase b | SAMN05660964_00014 | Not Available | Positive | 14414 - 15637 | 44538.0 |
| rare lipoprotein a | SAMN05660964_00015 | Not Available | Positive | 15770 - 16552 | 27977.0 |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN05660964_00016 | Not Available | Positive | 16623 - 17864 | 45666.2 |
| hypothetical protein | SAMN05660964_00017 | Not Available | Positive | 17889 - 18170 | 10822.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
