Microbulbifer marinus strain CGMCC 1.10657

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Cellvibrionales

Family

Microbulbiferaceae

Genus

Microbulbifer

Description

Microbulbifer marinus strain CGMCC 1.10657 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is non-motile and thrives optimally at a temperature of 29°C, categorizing it as mesophilic. Notably, it possesses a single replicon, which may influence its replication and genetic stability. The strain is part of the genus Microbulbifer, which is known for its ecological role in marine environments, particularly in the degradation of organic materials. The aerobic nature of Microbulbifer marinus indicates its reliance on oxygen for growth and metabolism, suggesting a potential involvement in biogeochemical cycles within its native habitat. Understanding the specific traits of Microbulbifer marinus strain CGMCC 1.10657 can provide insights into its ecological functions, particularly in nutrient cycling and organic matter decomposition in marine ecosystems. Its mesophilic characteristics suggest it could play a significant role in the microbial community dynamics in temperate marine environments. This knowledge contributes to the broader understanding of microbial diversity and the functional roles of bacteria in oceanic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCellvibrionales
FamilyMicrobulbiferaceae
GenusMicrobulbifer
SpeciesMicrobulbifer marinus
Strainstrain CGMCC 1.10657

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbulbifer marinus strain CGMCC 1.10657 genome assembly,

Gene Summary

Adenine Count

814943 bp

Thymine Count

787796 bp

Guanine Count

1166030 bp

Cytosine Count

1213431 bp

Genome Length

3982390 bp

Protein-coding Genes

3370 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
excinuclease abc subunit bSAMN05216562_0838Not AvailableNegative960472 - 96247876202.8
Trna-asnNot AvailableNot AvailablePositive962738 - 962810Not Available
ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epscSAMN05216562_0840Not AvailableNegative962957 - 96486169861.5
udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferaseSAMN05216562_0841Not AvailableNegative964976 - 96586331817.9
nucleoside-diphosphate-sugar epimeraseSAMN05216562_0842Not AvailableNegative965863 - 96678933882.8
competence protein comeaSAMN05216562_0843Not AvailableNegative966877 - 96718510915.2
orotidine-5'-phosphate decarboxylaseSAMN05216562_0844Not AvailableNegative967319 - 96804725373.9
lipopolysaccharide biosynthesis regulator ycim, contains six tpr domains and a predicted metal-binding c-terminal domainSAMN05216562_0845Not AvailableNegative968102 - 96929245358.3
protein of unknown functionSAMN05216562_0846Not AvailableNegative969299 - 96960711519.3
integration host factor subunit betaSAMN05216562_0847Not AvailableNegative969727 - 97003511521.0

Displaying genes 831 – 840 of 3418 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.