Rubrimonas cliftonensis strain DSM 15345

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Rubrimonas

Description

Rubrimonas cliftonensis strain DSM 15345 is a bacterial strain characterized by a single replicon, indicating a streamlined genomic structure. The genome of this strain is cataloged under the accession number FNQM00000000.1, which provides a reference point for researchers looking to study its genetic makeup and functionality. This strain belongs to the genus Rubrimonas, which is known for its environmental relevance. While specific ecological roles or metabolic capabilities of R. cliftonensis are not detailed in the provided traits, members of the Rubrimonas genus are typically associated with diverse habitats, including soil and aquatic environments, where they may play significant roles in nutrient cycling and ecological interactions. The presence of a single replicon suggests a certain level of genomic efficiency, which can be advantageous in various ecological contexts. Such efficiency might allow R. cliftonensis to quickly adapt to environmental changes or compete effectively for resources in its habitat. In summary, Rubrimonas cliftonensis strain DSM 15345, with its single replicon and documented genome accession, represents a potentially important organism in microbial ecology, highlighting the need for further exploration of its biological and ecological contributions. Understanding its role within its ecosystem could provide insights into microbial diversity and functionality in environmental contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusRubrimonas
SpeciesRubrimonas cliftonensis
Strainstrain DSM 15345

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rubrimonas cliftonensis strain DSM 15345 genome assembly, contig:

Gene Summary

Adenine Count

691386 bp

Thymine Count

692190 bp

Guanine Count

1740287 bp

Cytosine Count

1740205 bp

Genome Length

4864068 bp

Protein-coding Genes

4570 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ssu ribosomal protein s10pSAMN05444370_1232Not AvailablePositive4170008 - 417031611635.3
lsu ribosomal protein l3pSAMN05444370_1233Not AvailablePositive4170330 - 417107025977.5
lsu ribosomal protein l4pSAMN05444370_1234Not AvailablePositive4171067 - 417171723465.4
lsu ribosomal protein l23pSAMN05444370_1235Not AvailablePositive4171714 - 417201010676.0
lsu ribosomal protein l2pSAMN05444370_1236Not AvailablePositive4172051 - 417289030440.0
ssu ribosomal protein s19pSAMN05444370_1237Not AvailablePositive4172906 - 417318410327.5
lsu ribosomal protein l22pSAMN05444370_1238Not AvailablePositive4173187 - 417356413849.0
ssu ribosomal protein s3pSAMN05444370_1239Not AvailablePositive4173564 - 417428627103.8
lsu ribosomal protein l16pSAMN05444370_12310Not AvailablePositive4174309 - 417472215719.5
lsu ribosomal protein l29pSAMN05444370_12311Not AvailablePositive4175013 - 41752197614.05

Displaying genes 3931 – 3940 of 4640 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.