Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Rubrimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Rubrimonas |
| Species | Rubrimonas cliftonensis |
| Strain | strain DSM 15345 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
691386 bp
Thymine Count
692190 bp
Guanine Count
1740287 bp
Cytosine Count
1740205 bp
Genome Length
4864068 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN05444370_11286 | Not Available | Positive | 3496446 - 3497009 | 19411.9 |
| trap transporter, dctm subunit | SAMN05444370_11287 | Not Available | Positive | 3497006 - 3498334 | 46170.6 |
| putative transposase | SAMN05444370_11288 | Not Available | Negative | 3498536 - 3498856 | 11868.9 |
| transcriptional regulator, tetr family | SAMN05444370_11289 | Not Available | Negative | 3499180 - 3499734 | 20292.2 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05444370_11290 | Not Available | Positive | 3499907 - 3500464 | 20745.8 |
| hypothetical protein | SAMN05444370_11291 | Not Available | Positive | 3500628 - 3501131 | 17598.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05444370_11292 | Not Available | Positive | 3501569 - 3502348 | 27433.2 |
| peroxiredoxin | SAMN05444370_11293 | Not Available | Negative | 3502315 - 3503016 | 24867.8 |
| cupin | SAMN05444370_11294 | Not Available | Positive | 3503243 - 3503719 | 17389.8 |
| predicted arabinose efflux permease, mfs family | SAMN05444370_11295 | Not Available | Positive | 3503735 - 3504925 | 39071.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
