Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Rubrimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Rubrimonas |
| Species | Rubrimonas cliftonensis |
| Strain | strain DSM 15345 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
691386 bp
Thymine Count
692190 bp
Guanine Count
1740287 bp
Cytosine Count
1740205 bp
Genome Length
4864068 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic triphosphatase ygif, contains cyth and chad domains | SAMN05444370_101260 | Not Available | Negative | 287395 - 288939 | 55015.1 |
| dna ligase (nad+) | SAMN05444370_101261 | Not Available | Negative | 288979 - 291114 | 76455.5 |
| two component transcriptional regulator, winged helix family | SAMN05444370_101262 | Not Available | Negative | 291184 - 291897 | 26660.4 |
| protein of unknown function | SAMN05444370_101263 | Not Available | Negative | 292002 - 292274 | 9998.78 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | SAMN05444370_101264 | Not Available | Positive | 292364 - 293509 | 40375.1 |
| sulfate permease, sulp family | SAMN05444370_101265 | Not Available | Positive | 293664 - 295328 | 55920.0 |
| methylthioadenosine phosphorylase | SAMN05444370_101266 | Not Available | Negative | 295365 - 296237 | 30901.0 |
| peroxiredoxin | SAMN05444370_101267 | Not Available | Positive | 296370 - 296921 | 19464.2 |
| histidinol dehydrogenase | SAMN05444370_101268 | Not Available | Positive | 297010 - 298314 | 44855.4 |
| uncharacterized protein, upf0262 family | SAMN05444370_101269 | Not Available | Positive | 298311 - 298808 | 18268.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
