Herbiconiux ginsengi strain CGMCC 4.3491

rodaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Herbiconiux

Description

Herbiconiux ginsengi strain CGMCC 4.3491 is a Gram-positive, aerobic bacterium characterized by its rod-shaped morphology. This strain is non-motile and does not form spores, which distinguishes it from many other bacterial species that utilize mobility or sporulation as survival strategies. The optimal growth temperature for H. ginsengi is 29°C, placing it within the mesophilic temperature range. This temperature preference indicates that the bacterium thrives in moderate environmental conditions, which may be relevant for its ecological niche. The strain has a single replicon, suggesting a streamlined genomic organization that could be an adaptation to its environment. The accession number for this strain is FNPZ00000000.1, which provides a reference for further genetic and genomic studies. Understanding the traits of H. ginsengi can contribute to insights into its ecological role, particularly in environments where it may interact with other microorganisms or contribute to nutrient cycling. The aerobic nature of the strain indicates its reliance on oxygen for metabolism, which may impact its distribution in various habitats, such as soils or plant-associated environments where oxygen availability is sufficient. Overall, the physiological characteristics of Herbiconiux ginsengi strain CGMCC 4.3491 reflect its adaptation to specific ecological conditions, highlighting its potential importance in biological systems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusHerbiconiux
SpeciesHerbiconiux ginsengi
Strainstrain CGMCC 4.3491

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Herbiconiux ginsengi strain CGMCC 4.3491 genome assembly, contig:

Gene Summary

Adenine Count

766208 bp

Thymine Count

765905 bp

Guanine Count

1662037 bp

Cytosine Count

1658505 bp

Genome Length

4853715 bp

Protein-coding Genes

4502 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two-component system, ompr family, response regulator trcrSAMN05216554_0701Not AvailableNegative557218 - 55805130978.2
protein n-acetyltransferase, rimj/riml familySAMN05216554_0702Not AvailablePositive558063 - 55882428204.4
alkaline phosphataseSAMN05216554_0703Not AvailablePositive558973 - 56087163488.4
glyoxylase, beta-lactamase superfamily iiSAMN05216554_0704Not AvailableNegative560964 - 56166224561.2
uncharacterized conserved protein, duf1697 familySAMN05216554_0705Not AvailablePositive561690 - 56223819727.6
conserved protein containing a zn-ribbon-like motif, possibly rna-bindingSAMN05216554_0706Not AvailableNegative562498 - 56304920838.2
threonine/homoserine efflux transporter rhtaSAMN05216554_0707Not AvailablePositive563123 - 56419335626.7
enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 familySAMN05216554_0708Not AvailableNegative564255 - 56466814276.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)SAMN05216554_0709Not AvailablePositive564806 - 56567530591.0
uncharacterized protein, rmlc-like cupin domainSAMN05216554_0710Not AvailablePositive565672 - 56612116820.6

Displaying genes 551 – 560 of 4561 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.