Tindallia californiensis strain APO

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Peptostreptococcales

Family

Tindalliaceae

Genus

Tindallia

Description

Tindallia californiensis strain APO is an anaerobic bacterium, meaning it thrives in environments devoid of oxygen. This characteristic is significant as it indicates the strain's adaptation to specific ecological niches where oxygen is limited or absent, such as deep-sea sediments or certain types of wetlands. The strain has a single replicon, which suggests a streamlined genetic organization, potentially enhancing its efficiency in nutrient utilization and metabolic processes in its anaerobic habitat. The genomic data for Tindallia californiensis strain APO is cataloged under the accession number FNPV00000000.1, providing a reference point for researchers interested in studying this organism further. Understanding its genetic makeup may yield insights into its metabolic pathways and ecological role. The anaerobic nature of Tindallia californiensis strain APO may also have implications for biogeochemical cycles in its environment. Anaerobic bacteria are often involved in processes such as fermentation, denitrification, and methanogenesis, contributing to nutrient cycling and energy flow within ecosystems. The presence of Tindallia californiensis strain APO in an anaerobic ecosystem could therefore play a crucial role in maintaining ecological balance and supporting the diversity of microbial life in its habitat. Overall, the characteristics of this strain highlight its specialized adaptations and potential ecological significance.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderPeptostreptococcales
FamilyTindalliaceae
GenusTindallia
SpeciesTindallia californiensis
Strainstrain APO

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tindallia californiensis strain APO genome assembly, contig:

Gene Summary

Adenine Count

903415 bp

Thymine Count

970530 bp

Guanine Count

576919 bp

Cytosine Count

662820 bp

Genome Length

3122071 bp

Protein-coding Genes

2784 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05192546_101254Not AvailableNegative267840 - 26876335465.6
universal stress protein family proteinSAMN05192546_101255Not AvailableNegative268785 - 26917114336.6
bacterial peptide chain release factor 3 (brf-3)SAMN05192546_101256Not AvailableNegative269274 - 27088761535.9
permease of the drug/metabolite transporter (dmt) superfamilySAMN05192546_101257Not AvailableNegative270959 - 27187333946.7
6-phosphofructokinaseSAMN05192546_101258Not AvailablePositive272021 - 27323244209.6
nucleoside diphosphate kinaseSAMN05192546_101259Not AvailableNegative273237 - 27364715056.2
6,7-dimethyl-8-ribityllumazine synthaseSAMN05192546_101260Not AvailableNegative273676 - 27413716484.0
gtp cyclohydrolase ii /3,4-dihydroxy-2-butanone 4-phosphate synthaseSAMN05192546_101261Not AvailableNegative274163 - 27537144832.2
riboflavin synthase alpha chainSAMN05192546_101262Not AvailableNegative275385 - 27602623359.6
diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductaseSAMN05192546_101263Not AvailableNegative276011 - 27712940697.7

Displaying genes 341 – 350 of 2891 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.